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SARS-CoV-2 binding dataset
Dataset of 104972 antibodies screened for binding the SARS-CoV-2 HR peptide, described in Engelhart et al. (2022), were obtained from Zenodo.
Average predicted logKD values were used for classifying sequences as binders and non-binders:
- logKD<3 = binders
- logKD>=4 = non-binders
- logKD>=3 and logKD = ambiguous; removed.
Using these criteria, we have 51590 sequences remaining; these were stratified into an 80:10:10 ratio for training, test, validation, leading to:
- 41787 sequences in training
- 5159 sequences in validation
- 4644 sequences in test
Example
| vh | vl | label |
|---|---|---|
| EVQ... | DIQ... | 1 |
| EVQ... | DIQ... | 0 |
| EVQ... | DIQ... | 0 |
| EVQ... | DIQ... | 1 |
References
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